Explore a metabolic network in 3D

Load an SBML model to see species and reactions as a force-directed graph. Add a flux table to weight edges by simulated flux.

Step 1 · required SBML model Drop an .xml or .sbml file, or click to browse Step 2 · optional Flux table CSV with columns reaction_id,flux

Or start from an example

Drag to orbit · Right-drag to pan · Scroll to zoom · Double-click a node to fly to it Drag to pan · Scroll to zoom · Double-click a node to centre it

Metabolite

Side metabolite (copy per reaction)

Reaction, irreversible

Reaction, reversible

Runs against written direction

|v| · particles travel with the flow, faster = larger |v|

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